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Circulation of A2 Subclade of Avipoxvirus in Pigeons of the Andaman and Nicobar Islands, India


Affiliations
1 ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
 

Genus Avipoxvirus, an important member of the family Poxviridae, has 12 species which have been recognized by the International Committee on Taxonomy of Viruses (ICTV). Fowlpox virus and pigeonpox virus are two important species that may affect other species of birds, besides chicken and fowl. Hence, accurately identifying species, clades and subclades of Avipoxvirus is vital to design and implement adequate control strategies. The present study was carried out in a pigeon colony showing symptoms of pox. A fragment of viral Pan-genus 4b (P4b) gene was amplified and sequenced. As an equivocal and prototype species, sequence information of fowlpox virus isolated from an infected bird was also generated. The generated sequence information was compared with those of previously reported strains. It was found that both fowlpox and pigeonpox viruses belonged to clade A, and there was circulation of A1 and A2 subclades in chicken and pigeon respectively. From India, one report showed the circulation of A1 and A3 subclades in Indian chickens and pigeons respectively, since the other reports were based on clinical symptoms, histopathological examination and comparison of sequence information with those available without distinct demarcation of clade and subclade of Avipoxvirus. This study describes the findings of the novel A2 subclade of Avipoxvirus and the existence of pigeonpox in the Andaman and Nicobar Islands, India.

Keywords

Avipoxvirus, Chicken, Clade and Subclade, Fowlpox Virus, Pigeon.
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  • Williams, R. A. J., Truchado, D. A. and Benitez, L. A., Review on the prevalence of poxvirus disease in free-living and captive wild birds. Microbiol. Res., 2021, 12, 403–418.
  • Lefkowitz, E. J., Dempsey, D. M., Hendrickson, R. C., Orton, R. J., Siddell, S. G. and Smith, D. B., Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV). Nucleic Acids Res., 2018, 46, D708–D717.
  • Walker, P. J. et al., Changes to virus taxonomy and the Statutes ratified by the International Committee on Taxonomy of Viruses, Arch. Virol., 2020, 165, 2737–2748.
  • Adams, M. J. et al., Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses. Arch. Virol., 2016, 161, 2921–2949.
  • Tripathy, D. and Reed, W., Pox. In Diseases of Poultry (ed. Saif, Y.), Iowa State University Press, Ames, Iowa, USA, 2003, 11th edn, pp. 253–269.
  • Fenner, F., Poxviruses. In Fields Virology (Fields BN) (eds Knipe, D. M. et al.), Lippincott-Raven, Philadelphia, PA, USA, 1996, 3rd edn, pp. 2673–2702.
  • Johnson, B. J. and Castro, A. E., Canary pox causing high mortality in an aviary. J. Am. Vet. Med. Assoc., 1986, 189, 1345–1347.
  • Jarmin, S., Manvell, R., Gough, R. E., Laidlaw, S. M. and Skinner, M. A., Avipoxvirus phylogenetics: identification of a PCR length polymorphism that discriminates between the two major clades. J. Gen. Virol., 2006, 87, 2191–2201.
  • Sahu, B. P., Majee, P., Mishra, C., Dash, M., Biswal, S., Sahoo, N. and Nayak, D., The emergence of subclades A1 and A3 Avipoxviruses in India. Transbound. Emerg. Dis., 2020, 67, 510–517.
  • Singh, R., Kataria, J. M., Mullick, S. G., Mall, M. P. and Malhotra, D. P., An outbreak of pigeonpox involving eight local golla breed of pigeons in rural areas of Bareilly district. Indian J. Comp. Microbiol. Immunol. Infect. Dis., 1990, 11, 46–47.
  • Mohan, M. and Fernandez, T. F., A case report of pigeon pox–histopathologic diagnosis. Vet. World, 2008, 1, 117–118.
  • Dandapat, D. K., Mukhopadhayay, S. K., Ganguly, S., Dhanalakshmi, S. and Kar, I., Diseases of pigeon in and around Kolkata, India. J. Parasit. Dis., 2012, 36, 99–100.
  • Pawar, R. M., Bhushan, S. S., Poornachandar, A., Lakshmikantan, U. and Shivaji, S., Avian pox infection in different wild birds in India. Eur. J. Wildl. Res., 2011, 57, 785–793.
  • Sharma, B. et al., Occurrence and phylogenetic analysis of avipoxvirus isolated from birds around Jammu. Virus Dis., 2019, 30, 288–293.
  • Huw Lee, L. and Hwa Lee, K., Application of the polymerase chain reaction for the diagnosis of fowlpoxvirus infection. J. Virol. Method., 1997, 63, 113–119.
  • Kumar, S., Stecher, G., Li, M., Knyaz, C. and Tamura, K., MEGA X: molecular evolutionary genetics analysis across computing platforms. Mol. Biol. Evol., 2018, 35, 1547–1549.
  • Saitou, N. and Nei, M., The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 1987, 4, 406–425.
  • Leigh, J. W. and Bryant, D., Popart: full-feature software for haplo-type network construction. Meth. Ecol. Evol., 2015, 6, 1110–1116.
  • van Riper, C. and Forrester, D., Avian pox. In Infectious Diseases of Wild Birds (eds Thomas, N. J., Hunter, D. B. and Atkinson, C. T.), Blackwell Publishing, Ames, Iowa, USA, 2007, pp. 131–176.
  • Illera, J. C., Emerson, B. C. and Richardson, D. S., Genetic characterization, distribution and prevalence of avian pox and avian malaria in the Berthelot’s pipit (Anthus berthelotii) in Macaronesia. Parasitol. Res., 2008, 103, 1435–1443.
  • Bányai, K. et al., Unique genomic organization of a novel Avipoxvirus detected in turkey (Meleagris gallopavo). Infect. Genet. Evol., 2015, 35, 221–229.
  • Davidson, W. R. and Kellogg, F. E., An epornitic of avian pox in wild bobwhite quail. J. Wildl. Dis., 1980, 16, 293–298.
  • Docherty, D. E., Long, R. I., Flickinger, E. L. and Locke, L. N., Isolation of poxvirus from debilitating cutaneous lesions on four immature grackles (Quiscalus sp.). Avian. Dis., 1991, 35, 244–247.
  • Lüschow, D., Hoffmann, T. and Hafez, H. M., Differentiation of avian poxvirus strains on the basis of nucleotide sequences of 4b gene fragment. Avian Dis., 2004, 48, 453–462.
  • Abd El Hafez, M. S., Shosha, E. A. E. and Ibrahim, S. M., Isolation and molecular detection of pigeonpox virus in Assiut and New Valley governorates. J. Virol. Method., 2021, 293, 114–142.
  • Binns, M. M., Boursnell, M. E., Tomley, F. M. and Campbell, J., Analysis of the fowlpoxvirus gene encoding the 4b core polypeptide and demonstration that it possesses efficient promoter sequences. Virology, 1989, 170, 288–291.
  • Manarolla, G., Pisoni, G., Sironi, G. and Rampin, T., Molecular biological characterization of avian poxvirus strains isolated from different avian species. Vet. Microbiol., 2010, 140, 1–8.
  • Gyuranecz, M. et al., Worldwide phylogenetic relationship of avian poxviruses. J. Virol., 2013, 87, 4938–4951.

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  • Circulation of A2 Subclade of Avipoxvirus in Pigeons of the Andaman and Nicobar Islands, India

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Authors

Sujatha Tamilvanan
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Arun Kumar De
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Jai Sunder
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Gayatri Samaddar
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Perumal Ponraj
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Sneha Sawhney
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Debasis Bhattacharya
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India
Eaknath Bhanudasrao Chakurkar
ICAR-Central Island Agricultural Research Institute, Port Blair, Andaman and Nicobar Islands 744 101, India

Abstract


Genus Avipoxvirus, an important member of the family Poxviridae, has 12 species which have been recognized by the International Committee on Taxonomy of Viruses (ICTV). Fowlpox virus and pigeonpox virus are two important species that may affect other species of birds, besides chicken and fowl. Hence, accurately identifying species, clades and subclades of Avipoxvirus is vital to design and implement adequate control strategies. The present study was carried out in a pigeon colony showing symptoms of pox. A fragment of viral Pan-genus 4b (P4b) gene was amplified and sequenced. As an equivocal and prototype species, sequence information of fowlpox virus isolated from an infected bird was also generated. The generated sequence information was compared with those of previously reported strains. It was found that both fowlpox and pigeonpox viruses belonged to clade A, and there was circulation of A1 and A2 subclades in chicken and pigeon respectively. From India, one report showed the circulation of A1 and A3 subclades in Indian chickens and pigeons respectively, since the other reports were based on clinical symptoms, histopathological examination and comparison of sequence information with those available without distinct demarcation of clade and subclade of Avipoxvirus. This study describes the findings of the novel A2 subclade of Avipoxvirus and the existence of pigeonpox in the Andaman and Nicobar Islands, India.

Keywords


Avipoxvirus, Chicken, Clade and Subclade, Fowlpox Virus, Pigeon.

References





DOI: https://doi.org/10.18520/cs%2Fv125%2Fi8%2F896-900