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A Cost-effective, Modular, Research-grade Optical Microscope


Affiliations
1 Department of Physics, Indian Institute of Technology Guwahati, Guwahati 781 039, India
2 Department of Physics, Pragjyotish College, Guwahati 781 009, India
3 Department of Onco-pathology, Dr B. Borooah Cancer Institute, Guwahati 781 016, India
4 Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781 039, India
5 Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
6 Cairn Research Ltd, Graveney Road, Faversham, Kent ME13 8UP, United Kingdom

Optical microscopy is a ubiquitous tool in the physical and life sciences and in histopathology, where visible light microscopy is used to analyse clinical tissue sections at the micron scale to help diagnose diseases. In recent years, microscope technologies have dramatically evol­ved, but these have generally come with increased cost and complexity. To widen access to advanced microscopy capabilities, we have developed a cost-effective modular platform for optical microscopy (www.openscopes.com). Many of these instruments can be based around a new low-cost and flexible microscope stand, ‘openFrame’, for which the core components are open source. openFrame can support implementations of a wide range of microscope modalities for diverse applications, including research, pathology and training. Unlike many commercial microscopes that are often designed for specific applications and cannot be easily upgraded or adapted for different imaging modalities, openFrame-based instruments can be relatively easily maintained, upgraded or adapted to another modality without requiring manufacturer support. To this end, openFrame-based instruments are envisaged to operate with open-source software, enabling researchers to assemble and modify their microscopes with minimal challenges presented by proprietary (closed) hardware or software. Here, we describe the implementation of a low-cost, research-grade modular optical microscope applicable to research and pathology.

Keywords

Clinical diagnosis, imaging modalities, modular optical microscope, open-source software, research and pathology
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  • A Cost-effective, Modular, Research-grade Optical Microscope

Abstract Views: 174  | 

Authors

Anupam Bharadwaj
Department of Physics, Indian Institute of Technology Guwahati, Guwahati 781 039, India
Ranjan Kalita
Department of Physics, Pragjyotish College, Guwahati 781 009, India
Amalesh Kumar
Department of Physics, Indian Institute of Technology Guwahati, Guwahati 781 039, India
Anupam Sarma
Department of Onco-pathology, Dr B. Borooah Cancer Institute, Guwahati 781 016, India
Bithiah G. Jaganathan
Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781 039, India
Sunil Kumar
Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
Frederik Gorlitz
Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
Jonathan Lightley
Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
Chris Dunsby
Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
Mark Neil
Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
Callum Hollick
Cairn Research Ltd, Graveney Road, Faversham, Kent ME13 8UP, United Kingdom
Jeremy Graham
Cairn Research Ltd, Graveney Road, Faversham, Kent ME13 8UP, United Kingdom
P. M. W. French
Photonics Group, Department of Physics, Imperial College London, London SW7 2AZ, United Kingdom
Bosanta R. Boruah
Department of Physics, Indian Institute of Technology Guwahati, Guwahati 781 039, India

Abstract


Optical microscopy is a ubiquitous tool in the physical and life sciences and in histopathology, where visible light microscopy is used to analyse clinical tissue sections at the micron scale to help diagnose diseases. In recent years, microscope technologies have dramatically evol­ved, but these have generally come with increased cost and complexity. To widen access to advanced microscopy capabilities, we have developed a cost-effective modular platform for optical microscopy (www.openscopes.com). Many of these instruments can be based around a new low-cost and flexible microscope stand, ‘openFrame’, for which the core components are open source. openFrame can support implementations of a wide range of microscope modalities for diverse applications, including research, pathology and training. Unlike many commercial microscopes that are often designed for specific applications and cannot be easily upgraded or adapted for different imaging modalities, openFrame-based instruments can be relatively easily maintained, upgraded or adapted to another modality without requiring manufacturer support. To this end, openFrame-based instruments are envisaged to operate with open-source software, enabling researchers to assemble and modify their microscopes with minimal challenges presented by proprietary (closed) hardware or software. Here, we describe the implementation of a low-cost, research-grade modular optical microscope applicable to research and pathology.

Keywords


Clinical diagnosis, imaging modalities, modular optical microscope, open-source software, research and pathology



DOI: https://doi.org/10.18520/cs%2Fv126%2Fi2%2F244-254