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Endophyte Fungal Diversity in Nothapodytes nimmoniana along its Distributional Gradient in the Western Ghats, India:Are Camptothecine (Anticancer Alkaloid) Producing Endophytes Restricted to Specific Clades?


Affiliations
1 School of Ecology and Conservation and Department of Crop Physiology, University of Agricultural Sciences, GKVK, Bengaluru 560 065, India
2 Department of Crop Physiology, University of Agricultural and Horticultural Sciences, Shivamogga 577 201, India
3 Ashoka Trust for Research in Ecology and the Environment, Royal Enclave, Srirampura, Jakkur PO, Bengaluru 560 064, India
4 Centre for Structural and Functional Genomics and Biology Department, Concordia University, 7141 Sherbrooke West, Montreal, Quebec, H4B 1R6, Canada
5 Department of Applied Botany, Kuvempu University, Jnana Sahyadri, Shankaraghatta, Shivamogga 577 451, India
 

Nothapodytes nimmoniana Graham (Icacinaceae) is a small tree distributed along a 1600 km mountain range in the Western Ghats biodiversity hotspot in southern India. The stem wood of N. nimmoniana accumulates high concentration (about 0.3% by dry weight) of the anti-cancer alkaloid, camptothecine (CPT). Several endophytic fungi isolated from this plant have been shown to produce camptothecine in vitro. In this study, we examined the diversity and distribution of fungal endophytes of N. nimmoniana along its entire distributional range in the Western Ghats and investigated if the CPT-producing endophytes are restricted to any specific clade. The leaf and stem of N. nimmoniana were sampled from 18 sites along the Western Ghats spanning 8-18°N lat. Endophytes were recovered from all sites with the colonization frequency ranging from 0% to 52% across the sites. One hundred and four endo-phytic fungal isolates were recovered from 118 plants and characterized both morphologically and by sequencing the internally transcribed spacer region of the nuclear rDNA gene. The fungal isolates belonged to 45 species (44 Ascomycetes and one Basidiomycetes). Fusarium and Hypoxylon were the most predominant genera comprising over half of the total isolates. Interestingly, CPT-producing endophytes were not restricted to any specific clade. We discuss these results in the context of the growing interest in endophytic fungi as possible alternative sources of plant secondary metabolites.

Keywords

Camptothecine, Endophytic Fungi, Fungal Diversity and Distribution, Nothapodytes nimmoniana.
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  • Endophyte Fungal Diversity in Nothapodytes nimmoniana along its Distributional Gradient in the Western Ghats, India:Are Camptothecine (Anticancer Alkaloid) Producing Endophytes Restricted to Specific Clades?

Abstract Views: 368  |  PDF Views: 124

Authors

Singh Shweta
School of Ecology and Conservation and Department of Crop Physiology, University of Agricultural Sciences, GKVK, Bengaluru 560 065, India
B. R. Gurumurthy
Department of Crop Physiology, University of Agricultural and Horticultural Sciences, Shivamogga 577 201, India
M. M. Vasanthakumari
School of Ecology and Conservation and Department of Crop Physiology, University of Agricultural Sciences, GKVK, Bengaluru 560 065, India
G. Ravikanth
Ashoka Trust for Research in Ecology and the Environment, Royal Enclave, Srirampura, Jakkur PO, Bengaluru 560 064, India
S. Dayanandan
Centre for Structural and Functional Genomics and Biology Department, Concordia University, 7141 Sherbrooke West, Montreal, Quebec, H4B 1R6, Canada
R. Storms
Centre for Structural and Functional Genomics and Biology Department, Concordia University, 7141 Sherbrooke West, Montreal, Quebec, H4B 1R6, Canada
M. B. Shivanna
Department of Applied Botany, Kuvempu University, Jnana Sahyadri, Shankaraghatta, Shivamogga 577 451, India
R. Uma Shaanker
School of Ecology and Conservation and Department of Crop Physiology, University of Agricultural Sciences, GKVK, Bengaluru 560 065, India

Abstract


Nothapodytes nimmoniana Graham (Icacinaceae) is a small tree distributed along a 1600 km mountain range in the Western Ghats biodiversity hotspot in southern India. The stem wood of N. nimmoniana accumulates high concentration (about 0.3% by dry weight) of the anti-cancer alkaloid, camptothecine (CPT). Several endophytic fungi isolated from this plant have been shown to produce camptothecine in vitro. In this study, we examined the diversity and distribution of fungal endophytes of N. nimmoniana along its entire distributional range in the Western Ghats and investigated if the CPT-producing endophytes are restricted to any specific clade. The leaf and stem of N. nimmoniana were sampled from 18 sites along the Western Ghats spanning 8-18°N lat. Endophytes were recovered from all sites with the colonization frequency ranging from 0% to 52% across the sites. One hundred and four endo-phytic fungal isolates were recovered from 118 plants and characterized both morphologically and by sequencing the internally transcribed spacer region of the nuclear rDNA gene. The fungal isolates belonged to 45 species (44 Ascomycetes and one Basidiomycetes). Fusarium and Hypoxylon were the most predominant genera comprising over half of the total isolates. Interestingly, CPT-producing endophytes were not restricted to any specific clade. We discuss these results in the context of the growing interest in endophytic fungi as possible alternative sources of plant secondary metabolites.

Keywords


Camptothecine, Endophytic Fungi, Fungal Diversity and Distribution, Nothapodytes nimmoniana.



DOI: https://doi.org/10.18520/cs%2Fv109%2Fi1%2F127-138