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Molecular Modeling of Ribosomal Protein L4 in HUNGARY 19A-6 Strain of Streptococcus pneumoniae and Analysis of Lead Molecular Interaction


Affiliations
1 Department of Bioinformatics, Sathyabama University, Chennai-600119, India
 

Streptococcus pneumoniae is the major bacterial pathogen causing severe respiratory infections such as pneumonia, meningitis and septicaemia. HUNGARY19A-6 strain of Streptococcus pneumoniae is extremely virulent in pneumococcal pathogenesis which contains rpLD gene which synthesis Ribosomal protein L4. In this article we performed the insilico modeling studies of the virulent protein which is synthesized by the rpLD gene and validated the nature of the receptor based on their atomic interactions for future drug target for HUNGARY19A-6 strain of Streptococcus pneumoniae. We have also analyzed drug targets for the above mentioned protein by using the virtual structure based ligand screening approach. Protein-ligand complexes have been analyzed by docking studies using Discovery Studio and interactions have also been visualized along with the validation of pharmacokinetic descriptors.

Keywords

Pneumonia, Streptococcus pneumoniae, Ribosomal Protein , Hungary19 A-6, Homology, Molecular Docking.
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  • Molecular Modeling of Ribosomal Protein L4 in HUNGARY 19A-6 Strain of Streptococcus pneumoniae and Analysis of Lead Molecular Interaction

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Authors

Balasankar Karavadi
Department of Bioinformatics, Sathyabama University, Chennai-600119, India
M. Xavier Suresh
Department of Bioinformatics, Sathyabama University, Chennai-600119, India

Abstract


Streptococcus pneumoniae is the major bacterial pathogen causing severe respiratory infections such as pneumonia, meningitis and septicaemia. HUNGARY19A-6 strain of Streptococcus pneumoniae is extremely virulent in pneumococcal pathogenesis which contains rpLD gene which synthesis Ribosomal protein L4. In this article we performed the insilico modeling studies of the virulent protein which is synthesized by the rpLD gene and validated the nature of the receptor based on their atomic interactions for future drug target for HUNGARY19A-6 strain of Streptococcus pneumoniae. We have also analyzed drug targets for the above mentioned protein by using the virtual structure based ligand screening approach. Protein-ligand complexes have been analyzed by docking studies using Discovery Studio and interactions have also been visualized along with the validation of pharmacokinetic descriptors.

Keywords


Pneumonia, Streptococcus pneumoniae, Ribosomal Protein , Hungary19 A-6, Homology, Molecular Docking.