Open Access
Subscription Access
Genome-Wide Analysis of a Potent Functional Dairy Starter Bacterium Streptococcus thermophilus MTCC 5460:A Comprehensive Study of its Dairy Niche Adaptive Features
Genomic analysis of Streptococcus thermophilus strain MTCC 5460, an isolate from market dahi (curd), revealed particular gene features that contributed towards its adaptation to a dairy-specific niche. The genome comprising 1.6 Mb, encoding 1809 genes, revealed the presence of genes involved in lactose/galactose utilization; well-developed proteolytic system including cell envelop proteinases and several transporters; and bacteriocin synthesis and competence proteins involved in defence mechanism, which help prevent food spoilage. The genome comprised genes for stress resistance property of the strain, contributing to its gut endurance and gene encoding formation of aroma compounds. Unlike pathogenic streptococci, genes for virulence property were absent in the genome. Overall, the study revealed features within the genome that enabled the organism to survive in a gastric environment and assisted in its interaction with the host microbiota and mucosa, thus, validating the strain as a potent functional dairy starter and a promising candidate for potential probiotic applications.
Keywords
Dairy Starter, Genome, MTCC 5460, Probiotics.
User
Font Size
Information
- Goh, Y. J., Goin, C., O’Flaherty, S., Altermann, E. and Hutkins, R., Specialized adaptation of a lactic acid bacterium to the milk environment: The comparative genomics of streptococcus thermophilus lmd-9. Microb. Cell Fact., 2011, 10(Suppl 1), S22.
- Settachaimongkon, S. et al., Influence of different proteolytic strains of streptococcus thermophilus in co-culture with lactobacillus delbrueckii subsp. Bulgaricus on the metabolite profile of set-yoghurt. Int. J. Food Microbiol., 2014, 177, 29–36.
- Hols, P. et al., New insights in the molecular biology and physiology of streptococcus thermophilus revealed by comparative genomics. FEMS Microbiol. Rev., 2005, 29, 435–463.
- Meyer, A. L., Elmadfa, I., Herbacek, I. and Micksche, M., Probiotic, as well as conventional yogurt, can enhance the stimulated production of proinflammatory cytokines. J. Hum. Nutr. Diet., 2007, 20, 590–598.
- Rodriguez, C., Medici, M., Rodriguez, A. V., Mozzi, F. and Font de Valdez, G., Prevention of chronic gastritis by fermented milks made with exopolysaccharide-producing streptococcus thermophilus strains. J. Dairy Sci., 2009, 92, 2423–2434.
- Burton, J. P., Chilcott, C. N., Moore, C. J., Speiser, G. and Tagg, J. R., A preliminary study of the effect of probiotic streptococcus salivarius k12 on oral malodour parameters. J. Appl. Microbiol., 2006, 100, 754–764.
- Bolotin, A. et al., Complete sequence and comparative genome analysis of the dairy bacterium streptococcus thermophilus. Nat. Biotechnol., 2004, 22, 1554–1558.
- Salminen, S., Nurmi, J. and Gueimonde, M., The genomics of probiotic intestinal microorganisms. Genome Biol., 2005, 6, 225.
- Prajapati, J. B. et al., Whole-genome shotgun sequencing of an indian-origin lactobacillus helveticus strain, mtcc 5463, with probiotic potential. J. Bacteriol., 2011, 193, 4282–4283.
- Prajapati, J. B. et al., Whole-genome shotgun sequencing of lactobacillus rhamnosus mtcc 5462, a strain with probiotic potential. J. Bacteriol., 2012, 194, 1264–1265.
- Broadbent, J. R., McMahon, D. J., Welker, D. L., Oberg, C. J. and Moineau, S., Biochemistry, genetics, and applications of exopolysaccharide production in streptococcus thermophilus: a review. J. Dairy Sci., 2003, 86, 407–423.
- Mills, S., Griffin, C., Coffey, A., Meijer, W. C., Hafkamp, B. and Ross, R. P., Crispr analysis of bacteriophage-insensitive mutants (bims) of industrial streptococcus thermophilus – implications for starter design. J. Appl. Microbiol., 2010, 108, 945–955.
- Abendon, S. T., Bacterial ‘immunity’ against bacteriophages. Bacteriophage, 2012, 2, 50–54.
- Horvath, P. et al., Diversity, activity, and evolution of crispr loci in streptococcus thermophilus. J. Bacteriol., 2008, 190, 1401–1412.
- Prajapati, J. B., Nathani, N. M., Patel, A. K., Senan, S. and Joshi, C. G., Genomic analysis of dairy starter culture streptococcus thermophilus mtcc 5461. J. Microbiol. Biotechnol., 2013, 23, 459–466.
- Miyoshi, A. et al., Controlled production of stable heterologous proteins in lactococcus lactis. Appl. Environ. Microbiol., 2002, 68, 3141–3146.
- Poquet, I., Saint, V., Seznec, E., Simoes, N., Bolotin, A. and Gruss, A., Htra is the unique surface housekeeping protease in lactococcus lactis and is required for natural protein processing. Mol. Microbiol., 2000, 35, 1042–1050.
- Garault, P., Le Bars, D., Besset, C. and Monnet, V., Three oligopeptide-binding proteins are involved in the oligopeptide transport of streptococcus thermophilus. J. Biol. Chem., 2002, 277, 32–39.
- Monnet, V., Bacterial oligopeptide-binding proteins. Cell. Mol. Life Sci.: CMLS, 2003, 60, 2100–2114.
- Broadbent, J. R., Barnes, M., Brennand, C., Strickland, M., Houck, K., Johnson, M. E. and Steele, J. L., Contribution of lactococcus lactis cell envelope proteinase specificity to peptide accumulation and bitterness in reduced-fat cheddar cheese. Appl. Environ. Microbiol., 2002, 68, 1778–1785.
- Liu, M., Bayjanov, J. R., Renckens, B., Nauta, A. and Siezen, R. J., The proteolytic system of lactic acid bacteria revisited: a genomic comparison. BMC Genomics, 2010, 11, 36.
- Cotter, P. D. and Hill, C., Surviving the acid test: responses of gram-positive bacteria to low ph. Microbiol. Mol. Biol. Rev., 2003, 67, 429–453.
- Zotta, T., Ricciardi, A., Rossano, R. and Parente, E., Urease production by streptococcus thermophilus. Food Microbiol., 2008, 25, 113–119.
- Senan, S., Prajapati, J. B. and Joshi, C. G., Comparative genome-scale analysis of niche-based stress-responsive genes in lactobacillus helveticus strains. Genome, 2014, 57, 185–192.
- Krastel, K., Senadheera, D. B., Mair, R., Downey, J. S., Goodman, S. D. and Cvitkovitch, D. G., Characterization of a glutamate transporter operon, glnqhmp, in streptococcus mutans and its role in acid tolerance. J. Bacteriol., 2010, 192, 984–993.
- DeVuyst, L. and Leroy, F., Bacteriocins from lactic acid bacteria: Production, purification and food applications. J. Mol. Microbiol. Biotechnol., 2007, 13, 194–199.
- Leroy, F. and DeVuyst, L., Lactic acid bacteria as functional starter cultures for the food fermentation industry. Trends Food Sci. Technol., 2004, 15, 67–78.
- Claverys, J. P. and Martin, B., Bacterial 'competence' genes: signatures of active transformation, or only remnants? Trends Microbiol., 2003, 11, 161–165.
- Letort, C. and Juillard, V., Development of a minimal chemically-defined medium for the exponential growth of streptococcus thermophilus. J. Appl. Microbiol., 2001, 91, 1023–1029.
- Neviani, E., Giraffa, G., Brizzi, A. and Carminati, D., Amino acid requirements and peptidase activities of streptococcus salivarius subsp. Thermophilus. J. Appl. Bacteriol., 1995, 79, 302–307.
- Altermann, E. et al., Complete genome sequence of the probiotic lactic acid bacterium lactobacillus acidophilus ncfm. Proc. Natl. Acad. Sci. USA, 2005, 102, 3906–3912.
- Tanous, C., Kieronczyk, A., Helinck, S., Chambellon, E. and Yvon, M., Glutamate dehydrogenase activity: a major criterion for the selection of flavour-producing lactic acid bacteria strains. Antonie van Leeuwenhoek, 2002, 82, 271–278.
- Wu, Q., Tun, H. M., Leung, F. C. C. and Shah, N. P., Genomic insights into high exopolysaccharide-producing dairy starter bacterium streptococcus thermophilus ascc 1275. Sci. Rep., 2014, 4, 4974.
- Ott, A., Germond, J. E. and Chaintreau, A., Origin of acetaldehyde during milk fermentation using (13)c-labeled precursors. J. Agric. Food Chem., 2000, 48, 1512–1517.
- Teraguchi, S., Ono, J., Kiyosawa, I. and Okonogi, S., Oxygen uptake activity and aerobic metabolism of streptococcus thermophilus sth450. J. Dairy Sci., 1987, 70, 514–523.
Abstract Views: 446
PDF Views: 125