Open Access Open Access  Restricted Access Subscription Access

Production, Purification and Partial Characterization for an Oxalate Decarboxylase (OxDcase) from the Probiote Lactobacillus plantarum KSK-II


Affiliations
1 Department of Microbiology and Botany, Zagazig University, Zagazig, 44519, Egypt
 

Lactobacillus plantarum KSK-II was the most potent oxalate decomposer among various isolated lactic acid bacteria. There was no detectable extracellular or even intracellular oxalate decarboxylase (OxDcase) productivity in the absence of oxalate. The highest enzyme productivity was obtained at 72 h in a medium containing 0.1 M oxalate, 0.1% (w/v) D-glucose, 0.05% (w/v) soybean flour and 0.1% (w/v) of the prebiotics fructo-oligosaccharides and arabinogalactan. Enzyme purification increased its specific activity to 19.6-fold with 14.8% recovery and molecular weight of 63 kDa. The optimal reaction temperature, pH and pI values for OxDcase were 35°C, 5.0 and 3.5 respectively, and it was stable till 70°C and at pH 4.0–7.0 for 1 h. The apparent Km value of the enzyme was 12.70 mM, the turnover number (Kcat) was 64.10 s–1 and the catalytic efficiency (Kcat/Km) was 5.05 mM–1 s–1. Treatment of oxaluric rats with L. plantarum KSK-II and a prebiotic mixture significantly decreased oxalate levels inside their bodies suggesting a successful synbiobtic system in the prevention of oxalate stones. KSK-II OxDcase may also be clinically significant from the perspective of its thermo-tolerance and activation by triton X-100 and the reducing agents (sodium-L-ascorbate, potassium ferrocyanide and o-PDA). The non-inhibitory activity of chloride and the oxalate specificity are also significant for clinical applications of the enzyme in measuring of oxalate levels in body fluids.

Keywords

Calcium Oxalate, Lactobacillus plantarum, Oxalate Decarboxylase, Purification, Urolithiasis.
User
Notifications
Font Size

  • Tanner, A. and Bornemann, S., Bacillus subtilis YvrK is an acidinduced oxalate decarboxylase. Bacteriology, 2000, 182, 5271–5273.
  • Selvam, G. and Varalakshmi, P., Effect of different isomers of tartarate on oxalate metabolism in hyperoxaluric rats. Med. Sci. Res., 1989, 17, 685–689.
  • Dunwell, J., Purvis, A. and Khuri, S., Cupins: the most functionally diverse protein superfamily? Phytochemistry, 2004, 65, 7–17.
  • Shimazono, H., Oxalic acid decarboxylase, a new enzyme from the mycelium of wood destroying fungi. J. Biochem., 1955, 42, 321–340.
  • Emiliani, E. and Bekes, P., Enzymatic oxalate decarboxylation in Aspergillus niger. Arch. Biochem. Biophys., 1964, 105, 488–493.
  • Lillehoj, E. and Smith, F., An oxalic acid decarboxylase of Myrothecium verrucaria. Arch. Biochem. Biophys., 1965, 109, 216–220.
  • Magro, P., Marciano, P. and Di Lenna, P., Enzymatic oxalate decarboxylation in isolates of Sclerotinia sclerotiorum. FEMS Microbiol. Lett., 1988, 49, 49–52.
  • Dutton, M., Kathiara, M., Gallagher, I. and Evans, C., Purification and characterization of oxalate decarboxylase from Coriolus versicolor. FEMS Microbiol. Lett., 1994, 116, 321–326.
  • Aguilar, C., Urzua, U., Koenig, C. and Vicuna, R., Oxalate oxidase from Ceriporiopsis subvermispora: biochemical and cytochemical studies. Arch. Biochem. Biophys., 1999, 366, 275–282.
  • Kathiara, M., Wood, D. and Evans, C., Detection and partial characterization of oxalate decarboxylase from Agaricus biosporus. Mycol. Res., 2000, 104, 345–350.
  • Makela, M., Galkin, S., Hatakka, A. and Lundell, T., Production of oxganic acid and oxalate decarboxylase by lignin-degrading white rot fungi. Enzyme Microb. Technol., 2002, 30, 542–549.
  • Ren, L., Li, G., Han, Y., Jiang, D. and Huang, H., Degradation of oxalic acid by Coniothyrium minitans and its effects on production and activity of  -1,3-glucanase of this mycoparasite. Biol. Control, 2007, 43, 1–11.
  • Allison, M., Dawson, K., Mayberry, W. and Foss, J., Oxalobacter formigenes gen. nov., sp. nov.: oxalate-degrading anaerobes that inhabit the gastrointestinal tract. Arch. Microbiol., 1985, 141, 1–7.
  • Hokama, S., Honmaa, Y., Toma, C. and Ogawa, Y., Oxalate-degrading Enterococcus faecalis. Microbiol. Immunol., 2000, 44, 235–240.
  • Hokama, S., Toma, C., Iwanaga, M., Morozumi, M., Sugaya, K. and Ogawa, Y., Oxalate-degrading Providencia rettgeri isolated from human stools. Int. J. Urol., 2005, 12, 533–538.
  • Ito, H., Miura, N., Masai, M., Yamamoto, K. and Hara, T., Reduction of oxalate content of foods by the oxalate degrading bacterium, Eubacterium lentum WYH-1. Int. J. Urol., 1996, 3, 31–34.
  • Toyota, C., Berthold, C., Gruez, A., Jonsson, S., Lindqvist, Y., Cambillau, C. and Richards, N., Differential substrate specificity and kinetic behavior of Escherichia coli YfdW and Oxalobacter formigenes formyl coenzyme A transferase. J. Bacteriol., 2008, 190, 2556–2564.
  • Campieri, C. et al., Reduction of oxaluria after an oral course of lactic acid bacteria at high concentration. Kidney Int., 2001, 60, 1097–1105.
  • Gibson, G. and Robertfoid, M., Dietary modulation of the human colonic microbiota: introducing the concept of prebiotics. J. Nutr. 1995, 125, 1401–1412.
  • Jayasuria, G., The isolation and characteristics of an oxalate-decomposing organism. J. Gen. Microbiol., 1955, 12, 419–428.
  • Kotb, E., The biotechnological potential of subtilisin-like fibrinolytic enzyme from a newly isolated Lactobacillus plantarum KSK-II in blood destaining and antimicrobials. Biotechnol. Prog., 2015, 31(2), 316–324.
  • Laemmli, U., Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 1970, 227, 680–685.
  • Kantardjieff, K. and Rupp, B., Protein isoelectric point as a predictor for increased crystallization screening efficiency. Bioinformatics, 2004, 20(14), 2162–2168.
  • Ren, L., Li, G. and Jiang, D., Characterization of some culture factors affecting oxalate degradation by the mycoparasite Coniothyrium minitans. J. Appl. Microbiol., 2010, 108(1), 173–180.
  • Costa, T., Steil, L., Martins, L. O., Volker, U. and Henriques, A., Assembly of an oxalate decarboxylase produced under σK control into the Bacillus subtilis spore coat. J. Bacteriol., 2004, 186, 1462–1474.
  • Jin, Z., Wang, C., Chen, W., Chen, X. and Li, X., Induction of oxalate decarboxylase by oxalate in a newly isolated Pandoraea sp. OXJ-11 and its ability to protect against Sclerotinia sclerotiorum infection. Can. J. Microbiol., 2007, 53, 1316–1322.
  • Mehta, A. and Datta, A., Oxalate decarboxylase from Collybia velutipes. Purification, characterization, and cDNA cloning. J. Biol. Chem., 1991, 266, 23548–23553.
  • Weese, J., Weese, H., Yuricek, L. and Rousseau, J., Oxalate degradation by intestinal lactic acid bacteria in dogs and cats. Vet. Microbiol., 2004, 101, 161–166.
  • Rycroft, C., Jones, M., Gibson, G. and Rastall, R., A comparative in vitro evaluation of the fermentation properties of prebiotic oligosaccharides. J. Appl. Microbiol., 2001, 91, 878–887.
  • Makela, M., Hilden, K., Hatakka, A. and Lundell, T., Oxalate decarboxylase of the white-rot fungus Dichomitus squalens demonstrates a novel enzyme primary structure and non-induced expression on wood and in liquid cultures Microbiology, 2009, 155, 2726–2738.
  • Cassland, P., Sjode, A., Winestrand, S., Jonsson, L. and Nilvebrant, N., Evaluation of oxalate decarboxylase and oxalate oxidase for industrial applications. Appl. Biochem. Biotechnol., 2010, 161(1–8), 255–263.
  • Kotsira, V. and Clonis, Y., Oxalate oxidase from barley ischolar_mains: purification to homogeneity and study of some molecular, catalytic, and binding properties. Arch. Biochem. Biophys., 1997, 340, 239–249.
  • Svedruzic, D., Mechanism of the reaction catalyzed by the oxalate decarboxylase from Bacillus subtilis. Ph D thesis, University of Florida, USA, 2005.
  • Emiliani, E. and Riera, B., Enzymatic oxalate decarboxylation in Aspergillus niger: II. Hydrogen peroxide formation and other characteristics of the oxalate decarboxylase. Biochim. Biophys. Acta, 1968, 167, 414–421.
  • Whittaker, M. and Whittaker, J., Characterization of recombinant barley oxalate oxidase expressed by Pichia pastoris. J. Biol. Inorg. Chem., 2002, 7, 136–145.
  • Segel, I., In Enzyme Kinetics (ed. Segel, I. H.), Wiley-Interscience, New York, 1975.
  • Shimazono, H. and Hayaishi, O., Enzymatic decarboxylation of oxalic acid. J. Biol. Chem., 1957, 227, 151–159.
  • Azam, M., Kesarwani, M., Natarajan, K. and Datta, A., A secretion signal is present in the Collybia velutipes oxalate decarboxylase gene. Biochem. Biophys. Res. Commun., 2001, 289, 807–812.
  • Lin, R., Wu, R., Huang, X. and Xie, T., Immobilization of oxalate decarboxylase to Eupergit and properties of the immobilized enzyme. Prep. Biochem. Biotechnol., 2011, 41(2), 154–165.
  • Requena, L. and Bornemann, S., Barley (Hordeum vulgare) oxalate oxidase is a manganese-containing enzyme. Biochem. J., 1999, 343, 185–190.
  • Chiriboga, J., Purification and properties of oxalic acid oxidase. Arch. Biochem. Biophys., 1966, 116, 516–523.

Abstract Views: 389

PDF Views: 119




  • Production, Purification and Partial Characterization for an Oxalate Decarboxylase (OxDcase) from the Probiote Lactobacillus plantarum KSK-II

Abstract Views: 389  |  PDF Views: 119

Authors

Essam Kotb
Department of Microbiology and Botany, Zagazig University, Zagazig, 44519, Egypt

Abstract


Lactobacillus plantarum KSK-II was the most potent oxalate decomposer among various isolated lactic acid bacteria. There was no detectable extracellular or even intracellular oxalate decarboxylase (OxDcase) productivity in the absence of oxalate. The highest enzyme productivity was obtained at 72 h in a medium containing 0.1 M oxalate, 0.1% (w/v) D-glucose, 0.05% (w/v) soybean flour and 0.1% (w/v) of the prebiotics fructo-oligosaccharides and arabinogalactan. Enzyme purification increased its specific activity to 19.6-fold with 14.8% recovery and molecular weight of 63 kDa. The optimal reaction temperature, pH and pI values for OxDcase were 35°C, 5.0 and 3.5 respectively, and it was stable till 70°C and at pH 4.0–7.0 for 1 h. The apparent Km value of the enzyme was 12.70 mM, the turnover number (Kcat) was 64.10 s–1 and the catalytic efficiency (Kcat/Km) was 5.05 mM–1 s–1. Treatment of oxaluric rats with L. plantarum KSK-II and a prebiotic mixture significantly decreased oxalate levels inside their bodies suggesting a successful synbiobtic system in the prevention of oxalate stones. KSK-II OxDcase may also be clinically significant from the perspective of its thermo-tolerance and activation by triton X-100 and the reducing agents (sodium-L-ascorbate, potassium ferrocyanide and o-PDA). The non-inhibitory activity of chloride and the oxalate specificity are also significant for clinical applications of the enzyme in measuring of oxalate levels in body fluids.

Keywords


Calcium Oxalate, Lactobacillus plantarum, Oxalate Decarboxylase, Purification, Urolithiasis.

References





DOI: https://doi.org/10.18520/cs%2Fv114%2Fi04%2F835-844